Please use this identifier to cite or link to this item: http://hdl.handle.net/20.500.12857/116035
Title: A germline predictive signature of response to platinum chemotherapy in esophageal cancer
Authors: Rumiato, Enrica
Boldrin, Elisa 
Malacrida, Sandro 
Battaglia, Giorgio
Bocus, Paolo 
Castoro, Carlo 
Cagol, Matteo 
Chiarion-Sileni, Vanna
Ruol, Alberto 
Amadori, Alberto 
Saggioro, Daniela 
Keywords Plus: LUNG-CANCER;GENETIC-POLYMORPHISM;SURVIVAL;CHEMORADIOTHERAPY;PHARMACOGENETICS;ADENOCARCINOMA;TRANSPORTERS;ASSOCIATIONS;METAANALYSIS;MDM2-T309G
Mesh headings: Esophageal Neoplasms;Germ Cells;Platinum
Secondary Mesh headings: Aged;Female;Humans;Male;Middle Aged;Models, Genetic;Neoadjuvant Therapy;Polymorphism, Single Nucleotide;ROC Curve
Issue Date: May-2016
Publisher: ELSEVIER SCIENCE INC
Journal: Translational research : the journal of laboratory and clinical medicine 
Abstract: 
Platinum-based neoadjuvant therapy is the standard treatment for esophageal cancer (EC). At present, no reliable response markers exist, and patient therapeutic outcome is variable and very often unpredictable. The aim of this study was to understand the contribution of host constitutive DNA polymorphisms in discriminating between responder and nonresponder patients. DNA collected from 120 EC patients treated with platinum-based neoadjuvant chemotherapy was analyzed using drug metabolism enzymes and transporters (DMET) array platform that interrogates polymorphisms in 225 genes of drug metabolism and disposition. Four gene variants of DNA repair machinery, 2 in ERCC1 (rs11615; rs3212986), and 2 in XPD (rs1799793; rs13181) were also studied. Association analysis was performed with pTest software and corrected by permutation test. Predictive models of response were created using the receiver-operating characteristics curve approach and adjusted by the bootstrap procedure. Sixteen single nucleotide polymorphisms (SNPs) of the DMET array resulted significantly associated with either good or poor response; no association was found for the 4 variants mapping in DNA repair genes. The predictive power of 5 DMET SNPs mapping in ABCC2, ABCC3, CYP2A6, PPARG, and SLC7A8 genes was greater than that of clinical factors alone (area under the curve [AUC] = 0.74 vs 0.62). Interestingly, their combination with the clinical variables significantly increased the predictivity of the model (AUC = 0.78 vs 0.62, P = 0.0016). In conclusion, we identified a genetic signature of response to platinum-based neoadjuvant chemotherapy in EC patients. Our results also disclose the potential benefit of combining genetic and clinical variables for personalized EC management.
URI: http://hdl.handle.net/20.500.12857/116035
ISSN: 19315244
DOI: 10.1016/j.trsl.2015.12.011
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